pbabe hygro htert plasmid (Addgene inc)
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Addgene inc
pbabe hygro htert plasmid
Pbabe Hygro Htert Plasmid, supplied by Addgene inc, used in various techniques. Bioz Stars score: 93/100, based on 103 PubMed citations. ZERO BIAS - scores, article reviews, protocol conditions and more
https://www.bioz.com/product/pbabe-hygro/pBABE-hygro-hTERT+(Plasmid+%231773)/pmc12961426-53-23-25
Average 93 stars, based on 103 article reviews
Pbabe Hygro Htert Plasmid, supplied by Addgene inc, used in various techniques. Bioz Stars score: 93/100, based on 103 PubMed citations. ZERO BIAS - scores, article reviews, protocol conditions and more
https://www.bioz.com/product/pbabe-hygro/pBABE-hygro-hTERT+(Plasmid+%231773)/pmc12961426-53-23-25
Average 93 stars, based on 103 article reviews
pbabe hygro htert plasmid - by Bioz Stars,
2026-09
93/100 stars
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Polymerase Chain Reaction:Article Title: Vimentin intermediate filaments and filamentous actin form unexpected interpenetrating networks that redefine the cell cortex Article Snippet: The PCR product is purified from an agarose gel and inserted into pBABE-hygro (pBABE-hygro is a gift from Hartmut Land and Jay P. Morgenstern, Imperial Cancer Research Fund, Lincoln's Inn Fields, London ( ) [ Article Title: Mouse Genetics Suggests Cell-Context Dependency for Myc-Regulated Metabolic Enzymes during Tumorigenesis Article Snippet: For retroviruses the following Article Title: VPS37A directs ESCRT recruitment for phagophore closure Article Snippet: The following plasmids were obtained from Hartmut Land (University of Rochester Medical Center, Rochester, NY), Jay Morgenstern (Imperial Cancer Research Fund, London, UK), Bob Weinberg (Whitehead Institute for Biomedical Research, Cambridge, MA), Feng Zhang (Massachusetts Institute of Technology, Cambridge, MA), Brett Stringer (QIMR Berghofer Medical Research Institute, Brisbane, Australia), Christopher Vakoc (Cold Spring Harbor Laboratory, Cold Spring Harbor, NY), Noboru Mizushima (The University of Tokyo, Tokyo, Japan), Article Title: Mouse genetics suggests cell-context dependency for Myc-regulated metabolic enzymes during tumorigenesis. Article Snippet: For retroviruses the following Article Title: Progerin reduces LAP2α-telomere association in Hutchinson-Gilford progeria Article Snippet: LAP2α was amplified from pTD15 (gift from Dr Roland Foisner, Vienna). cDNAs were cloned into retroviral vector pBABE-hygro (Addgene, Cambridge, MA) or doxycyclin-inducible lentiviral vector pTRIPZ (Open Biosystem, Singapore). Article Title: A Role for p53 in the Adaptation to Glutamine Starvation through the Expression of SLC1A3 Article Snippet: REAGENT or RESOURCE SOURCE IDENTIFIER Software and Algorithms GraphPad Prism 7 GraphPad software N/A FlowJo software v.10.3 FlowJo N/A CRISPR Design Tool Feng Zhang Lab (MIT) http://tools.genome-engineering.org CRISPOR Design Tool Tefor Infrastructure http://crispor.tefor.net/crispor.py IPA Qiagen https://www.qiagenbioinformatics.com/ products/ingenuity-pathway-analysis/ TopHat2 Kim et al., 2013 https://ccb.jhu.edu/software/tophat/ index.shtml HTSeq v.0.10.0 Simon Anders (EMBL Heidelberg) https://htseq.readthedocs.io/en/ release_0.10.0/ DESeq2 Love et al., 2014 https://bioconductor.org/packages/ release/bioc/html/DESeq2.html Cufflinks Trapnell et al., 2012 http://cole-trapnell-lab.github.io/ cufflinks/cuffdiff/ TraceFinder Version 4.1 Thermo Fisher Scientific OPTON-30626 Image Studio Lite Version 5.2.5 LI-COR https://www.licor.com/bio/products/ software/image_studio/ Article Title: CD44 correlates with longevity and enhances basal ATF6 activity and ER stress resistance. Article Snippet: REAGENT or RESOURCE SOURCE IDENTIFIER pBabe-hygro Morgenstern and Article Title: CUX1 Enhances Pancreatic Cancer Formation by Synergizing with KRAS and Inducing MEK/ERK-Dependent Proliferation Article Snippet: The oncogenic KrasG12D was cloned from the pBabe-puro vector, a kind gift from Channing Der (Addgene plasmid # 58902, Watertown, MA, USA), into the pBabe-hygro, a gift from Hartmut Land, Purification:Article Title: Vimentin intermediate filaments and filamentous actin form unexpected interpenetrating networks that redefine the cell cortex Article Snippet: The PCR product is purified from an agarose gel and inserted into pBABE-hygro (pBABE-hygro is a gift from Hartmut Land and Jay P. Morgenstern, Imperial Cancer Research Fund, Lincoln's Inn Fields, London ( ) [ Article Title: Mouse Genetics Suggests Cell-Context Dependency for Myc-Regulated Metabolic Enzymes during Tumorigenesis Article Snippet: For retroviruses the following Article Title: VPS37A directs ESCRT recruitment for phagophore closure Article Snippet: The following plasmids were obtained from Hartmut Land (University of Rochester Medical Center, Rochester, NY), Jay Morgenstern (Imperial Cancer Research Fund, London, UK), Bob Weinberg (Whitehead Institute for Biomedical Research, Cambridge, MA), Feng Zhang (Massachusetts Institute of Technology, Cambridge, MA), Brett Stringer (QIMR Berghofer Medical Research Institute, Brisbane, Australia), Christopher Vakoc (Cold Spring Harbor Laboratory, Cold Spring Harbor, NY), Noboru Mizushima (The University of Tokyo, Tokyo, Japan), Article Title: Mouse genetics suggests cell-context dependency for Myc-regulated metabolic enzymes during tumorigenesis. Article Snippet: For retroviruses the following Article Title: Progerin reduces LAP2α-telomere association in Hutchinson-Gilford progeria Article Snippet: LAP2α was amplified from pTD15 (gift from Dr Roland Foisner, Vienna). cDNAs were cloned into retroviral vector pBABE-hygro (Addgene, Cambridge, MA) or doxycyclin-inducible lentiviral vector pTRIPZ (Open Biosystem, Singapore). Article Title: A Role for p53 in the Adaptation to Glutamine Starvation through the Expression of SLC1A3 Article Snippet: REAGENT or RESOURCE SOURCE IDENTIFIER Software and Algorithms GraphPad Prism 7 GraphPad software N/A FlowJo software v.10.3 FlowJo N/A CRISPR Design Tool Feng Zhang Lab (MIT) http://tools.genome-engineering.org CRISPOR Design Tool Tefor Infrastructure http://crispor.tefor.net/crispor.py IPA Qiagen https://www.qiagenbioinformatics.com/ products/ingenuity-pathway-analysis/ TopHat2 Kim et al., 2013 https://ccb.jhu.edu/software/tophat/ index.shtml HTSeq v.0.10.0 Simon Anders (EMBL Heidelberg) https://htseq.readthedocs.io/en/ release_0.10.0/ DESeq2 Love et al., 2014 https://bioconductor.org/packages/ release/bioc/html/DESeq2.html Cufflinks Trapnell et al., 2012 http://cole-trapnell-lab.github.io/ cufflinks/cuffdiff/ TraceFinder Version 4.1 Thermo Fisher Scientific OPTON-30626 Image Studio Lite Version 5.2.5 LI-COR https://www.licor.com/bio/products/ software/image_studio/ Article Title: CD44 correlates with longevity and enhances basal ATF6 activity and ER stress resistance. Article Snippet: REAGENT or RESOURCE SOURCE IDENTIFIER pBabe-hygro Morgenstern and Article Title: CUX1 Enhances Pancreatic Cancer Formation by Synergizing with KRAS and Inducing MEK/ERK-Dependent Proliferation Article Snippet: The oncogenic KrasG12D was cloned from the pBabe-puro vector, a kind gift from Channing Der (Addgene plasmid # 58902, Watertown, MA, USA), into the pBabe-hygro, a gift from Hartmut Land, Agarose Gel Electrophoresis:Article Title: Vimentin intermediate filaments and filamentous actin form unexpected interpenetrating networks that redefine the cell cortex Article Snippet: The PCR product is purified from an agarose gel and inserted into pBABE-hygro (pBABE-hygro is a gift from Hartmut Land and Jay P. Morgenstern, Imperial Cancer Research Fund, Lincoln's Inn Fields, London ( ) [ Article Title: Mouse Genetics Suggests Cell-Context Dependency for Myc-Regulated Metabolic Enzymes during Tumorigenesis Article Snippet: For retroviruses the following Article Title: VPS37A directs ESCRT recruitment for phagophore closure Article Snippet: The following plasmids were obtained from Hartmut Land (University of Rochester Medical Center, Rochester, NY), Jay Morgenstern (Imperial Cancer Research Fund, London, UK), Bob Weinberg (Whitehead Institute for Biomedical Research, Cambridge, MA), Feng Zhang (Massachusetts Institute of Technology, Cambridge, MA), Brett Stringer (QIMR Berghofer Medical Research Institute, Brisbane, Australia), Christopher Vakoc (Cold Spring Harbor Laboratory, Cold Spring Harbor, NY), Noboru Mizushima (The University of Tokyo, Tokyo, Japan), Article Title: Mouse genetics suggests cell-context dependency for Myc-regulated metabolic enzymes during tumorigenesis. Article Snippet: For retroviruses the following Article Title: Progerin reduces LAP2α-telomere association in Hutchinson-Gilford progeria Article Snippet: LAP2α was amplified from pTD15 (gift from Dr Roland Foisner, Vienna). cDNAs were cloned into retroviral vector pBABE-hygro (Addgene, Cambridge, MA) or doxycyclin-inducible lentiviral vector pTRIPZ (Open Biosystem, Singapore). Article Title: A Role for p53 in the Adaptation to Glutamine Starvation through the Expression of SLC1A3 Article Snippet: REAGENT or RESOURCE SOURCE IDENTIFIER Software and Algorithms GraphPad Prism 7 GraphPad software N/A FlowJo software v.10.3 FlowJo N/A CRISPR Design Tool Feng Zhang Lab (MIT) http://tools.genome-engineering.org CRISPOR Design Tool Tefor Infrastructure http://crispor.tefor.net/crispor.py IPA Qiagen https://www.qiagenbioinformatics.com/ products/ingenuity-pathway-analysis/ TopHat2 Kim et al., 2013 https://ccb.jhu.edu/software/tophat/ index.shtml HTSeq v.0.10.0 Simon Anders (EMBL Heidelberg) https://htseq.readthedocs.io/en/ release_0.10.0/ DESeq2 Love et al., 2014 https://bioconductor.org/packages/ release/bioc/html/DESeq2.html Cufflinks Trapnell et al., 2012 http://cole-trapnell-lab.github.io/ cufflinks/cuffdiff/ TraceFinder Version 4.1 Thermo Fisher Scientific OPTON-30626 Image Studio Lite Version 5.2.5 LI-COR https://www.licor.com/bio/products/ software/image_studio/ Article Title: CD44 correlates with longevity and enhances basal ATF6 activity and ER stress resistance. Article Snippet: REAGENT or RESOURCE SOURCE IDENTIFIER pBabe-hygro Morgenstern and Article Title: CUX1 Enhances Pancreatic Cancer Formation by Synergizing with KRAS and Inducing MEK/ERK-Dependent Proliferation Article Snippet: The oncogenic KrasG12D was cloned from the pBabe-puro vector, a kind gift from Channing Der (Addgene plasmid # 58902, Watertown, MA, USA), into the pBabe-hygro, a gift from Hartmut Land, Plasmid Preparation:Article Title: Vimentin intermediate filaments and filamentous actin form unexpected interpenetrating networks that redefine the cell cortex Article Snippet: The PCR product is purified from an agarose gel and inserted into pBABE-hygro (pBABE-hygro is a gift from Hartmut Land and Jay P. Morgenstern, Imperial Cancer Research Fund, Lincoln's Inn Fields, London ( ) [ Article Title: Mouse Genetics Suggests Cell-Context Dependency for Myc-Regulated Metabolic Enzymes during Tumorigenesis Article Snippet: For retroviruses the following Article Title: VPS37A directs ESCRT recruitment for phagophore closure Article Snippet: The following plasmids were obtained from Hartmut Land (University of Rochester Medical Center, Rochester, NY), Jay Morgenstern (Imperial Cancer Research Fund, London, UK), Bob Weinberg (Whitehead Institute for Biomedical Research, Cambridge, MA), Feng Zhang (Massachusetts Institute of Technology, Cambridge, MA), Brett Stringer (QIMR Berghofer Medical Research Institute, Brisbane, Australia), Christopher Vakoc (Cold Spring Harbor Laboratory, Cold Spring Harbor, NY), Noboru Mizushima (The University of Tokyo, Tokyo, Japan), Article Title: Mouse genetics suggests cell-context dependency for Myc-regulated metabolic enzymes during tumorigenesis. Article Snippet: For retroviruses the following Article Title: Progerin reduces LAP2α-telomere association in Hutchinson-Gilford progeria Article Snippet: LAP2α was amplified from pTD15 (gift from Dr Roland Foisner, Vienna). cDNAs were cloned into retroviral vector pBABE-hygro (Addgene, Cambridge, MA) or doxycyclin-inducible lentiviral vector pTRIPZ (Open Biosystem, Singapore). Article Title: A Role for p53 in the Adaptation to Glutamine Starvation through the Expression of SLC1A3 Article Snippet: REAGENT or RESOURCE SOURCE IDENTIFIER Software and Algorithms GraphPad Prism 7 GraphPad software N/A FlowJo software v.10.3 FlowJo N/A CRISPR Design Tool Feng Zhang Lab (MIT) http://tools.genome-engineering.org CRISPOR Design Tool Tefor Infrastructure http://crispor.tefor.net/crispor.py IPA Qiagen https://www.qiagenbioinformatics.com/ products/ingenuity-pathway-analysis/ TopHat2 Kim et al., 2013 https://ccb.jhu.edu/software/tophat/ index.shtml HTSeq v.0.10.0 Simon Anders (EMBL Heidelberg) https://htseq.readthedocs.io/en/ release_0.10.0/ DESeq2 Love et al., 2014 https://bioconductor.org/packages/ release/bioc/html/DESeq2.html Cufflinks Trapnell et al., 2012 http://cole-trapnell-lab.github.io/ cufflinks/cuffdiff/ TraceFinder Version 4.1 Thermo Fisher Scientific OPTON-30626 Image Studio Lite Version 5.2.5 LI-COR https://www.licor.com/bio/products/ software/image_studio/ Article Title: CD44 correlates with longevity and enhances basal ATF6 activity and ER stress resistance. Article Snippet: REAGENT or RESOURCE SOURCE IDENTIFIER pBabe-hygro Morgenstern and Article Title: CUX1 Enhances Pancreatic Cancer Formation by Synergizing with KRAS and Inducing MEK/ERK-Dependent Proliferation Article Snippet: The oncogenic KrasG12D was cloned from the pBabe-puro vector, a kind gift from Channing Der (Addgene plasmid # 58902, Watertown, MA, USA), into the pBabe-hygro, a gift from Hartmut Land, Clone Assay:Article Title: Vimentin intermediate filaments and filamentous actin form unexpected interpenetrating networks that redefine the cell cortex Article Snippet: The PCR product is purified from an agarose gel and inserted into pBABE-hygro (pBABE-hygro is a gift from Hartmut Land and Jay P. Morgenstern, Imperial Cancer Research Fund, Lincoln's Inn Fields, London ( ) [ Article Title: Mouse Genetics Suggests Cell-Context Dependency for Myc-Regulated Metabolic Enzymes during Tumorigenesis Article Snippet: For retroviruses the following Article Title: VPS37A directs ESCRT recruitment for phagophore closure Article Snippet: The following plasmids were obtained from Hartmut Land (University of Rochester Medical Center, Rochester, NY), Jay Morgenstern (Imperial Cancer Research Fund, London, UK), Bob Weinberg (Whitehead Institute for Biomedical Research, Cambridge, MA), Feng Zhang (Massachusetts Institute of Technology, Cambridge, MA), Brett Stringer (QIMR Berghofer Medical Research Institute, Brisbane, Australia), Christopher Vakoc (Cold Spring Harbor Laboratory, Cold Spring Harbor, NY), Noboru Mizushima (The University of Tokyo, Tokyo, Japan), Article Title: Mouse genetics suggests cell-context dependency for Myc-regulated metabolic enzymes during tumorigenesis. Article Snippet: For retroviruses the following Article Title: Progerin reduces LAP2α-telomere association in Hutchinson-Gilford progeria Article Snippet: LAP2α was amplified from pTD15 (gift from Dr Roland Foisner, Vienna). cDNAs were cloned into retroviral vector pBABE-hygro (Addgene, Cambridge, MA) or doxycyclin-inducible lentiviral vector pTRIPZ (Open Biosystem, Singapore). Article Title: A Role for p53 in the Adaptation to Glutamine Starvation through the Expression of SLC1A3 Article Snippet: REAGENT or RESOURCE SOURCE IDENTIFIER Software and Algorithms GraphPad Prism 7 GraphPad software N/A FlowJo software v.10.3 FlowJo N/A CRISPR Design Tool Feng Zhang Lab (MIT) http://tools.genome-engineering.org CRISPOR Design Tool Tefor Infrastructure http://crispor.tefor.net/crispor.py IPA Qiagen https://www.qiagenbioinformatics.com/ products/ingenuity-pathway-analysis/ TopHat2 Kim et al., 2013 https://ccb.jhu.edu/software/tophat/ index.shtml HTSeq v.0.10.0 Simon Anders (EMBL Heidelberg) https://htseq.readthedocs.io/en/ release_0.10.0/ DESeq2 Love et al., 2014 https://bioconductor.org/packages/ release/bioc/html/DESeq2.html Cufflinks Trapnell et al., 2012 http://cole-trapnell-lab.github.io/ cufflinks/cuffdiff/ TraceFinder Version 4.1 Thermo Fisher Scientific OPTON-30626 Image Studio Lite Version 5.2.5 LI-COR https://www.licor.com/bio/products/ software/image_studio/ Article Title: CD44 correlates with longevity and enhances basal ATF6 activity and ER stress resistance. Article Snippet: REAGENT or RESOURCE SOURCE IDENTIFIER pBabe-hygro Morgenstern and Article Title: CUX1 Enhances Pancreatic Cancer Formation by Synergizing with KRAS and Inducing MEK/ERK-Dependent Proliferation Article Snippet: The oncogenic KrasG12D was cloned from the pBabe-puro vector, a kind gift from Channing Der (Addgene plasmid # 58902, Watertown, MA, USA), into the pBabe-hygro, a gift from Hartmut Land, Multiple Displacement Amplification:Article Title: Vimentin intermediate filaments and filamentous actin form unexpected interpenetrating networks that redefine the cell cortex Article Snippet: The PCR product is purified from an agarose gel and inserted into pBABE-hygro (pBABE-hygro is a gift from Hartmut Land and Jay P. Morgenstern, Imperial Cancer Research Fund, Lincoln's Inn Fields, London ( ) [ Article Title: Mouse Genetics Suggests Cell-Context Dependency for Myc-Regulated Metabolic Enzymes during Tumorigenesis Article Snippet: For retroviruses the following Article Title: VPS37A directs ESCRT recruitment for phagophore closure Article Snippet: The following plasmids were obtained from Hartmut Land (University of Rochester Medical Center, Rochester, NY), Jay Morgenstern (Imperial Cancer Research Fund, London, UK), Bob Weinberg (Whitehead Institute for Biomedical Research, Cambridge, MA), Feng Zhang (Massachusetts Institute of Technology, Cambridge, MA), Brett Stringer (QIMR Berghofer Medical Research Institute, Brisbane, Australia), Christopher Vakoc (Cold Spring Harbor Laboratory, Cold Spring Harbor, NY), Noboru Mizushima (The University of Tokyo, Tokyo, Japan), Article Title: Mouse genetics suggests cell-context dependency for Myc-regulated metabolic enzymes during tumorigenesis. Article Snippet: For retroviruses the following Article Title: Progerin reduces LAP2α-telomere association in Hutchinson-Gilford progeria Article Snippet: LAP2α was amplified from pTD15 (gift from Dr Roland Foisner, Vienna). cDNAs were cloned into retroviral vector pBABE-hygro (Addgene, Cambridge, MA) or doxycyclin-inducible lentiviral vector pTRIPZ (Open Biosystem, Singapore). Article Title: A Role for p53 in the Adaptation to Glutamine Starvation through the Expression of SLC1A3 Article Snippet: REAGENT or RESOURCE SOURCE IDENTIFIER Software and Algorithms GraphPad Prism 7 GraphPad software N/A FlowJo software v.10.3 FlowJo N/A CRISPR Design Tool Feng Zhang Lab (MIT) http://tools.genome-engineering.org CRISPOR Design Tool Tefor Infrastructure http://crispor.tefor.net/crispor.py IPA Qiagen https://www.qiagenbioinformatics.com/ products/ingenuity-pathway-analysis/ TopHat2 Kim et al., 2013 https://ccb.jhu.edu/software/tophat/ index.shtml HTSeq v.0.10.0 Simon Anders (EMBL Heidelberg) https://htseq.readthedocs.io/en/ release_0.10.0/ DESeq2 Love et al., 2014 https://bioconductor.org/packages/ release/bioc/html/DESeq2.html Cufflinks Trapnell et al., 2012 http://cole-trapnell-lab.github.io/ cufflinks/cuffdiff/ TraceFinder Version 4.1 Thermo Fisher Scientific OPTON-30626 Image Studio Lite Version 5.2.5 LI-COR https://www.licor.com/bio/products/ software/image_studio/ Article Title: CD44 correlates with longevity and enhances basal ATF6 activity and ER stress resistance. Article Snippet: REAGENT or RESOURCE SOURCE IDENTIFIER pBabe-hygro Morgenstern and Article Title: CUX1 Enhances Pancreatic Cancer Formation by Synergizing with KRAS and Inducing MEK/ERK-Dependent Proliferation Article Snippet: The oncogenic KrasG12D was cloned from the pBabe-puro vector, a kind gift from Channing Der (Addgene plasmid # 58902, Watertown, MA, USA), into the pBabe-hygro, a gift from Hartmut Land, Recombinant:Article Title: Vimentin intermediate filaments and filamentous actin form unexpected interpenetrating networks that redefine the cell cortex Article Snippet: The PCR product is purified from an agarose gel and inserted into pBABE-hygro (pBABE-hygro is a gift from Hartmut Land and Jay P. Morgenstern, Imperial Cancer Research Fund, Lincoln's Inn Fields, London ( ) [ Article Title: Mouse Genetics Suggests Cell-Context Dependency for Myc-Regulated Metabolic Enzymes during Tumorigenesis Article Snippet: For retroviruses the following Article Title: VPS37A directs ESCRT recruitment for phagophore closure Article Snippet: The following plasmids were obtained from Hartmut Land (University of Rochester Medical Center, Rochester, NY), Jay Morgenstern (Imperial Cancer Research Fund, London, UK), Bob Weinberg (Whitehead Institute for Biomedical Research, Cambridge, MA), Feng Zhang (Massachusetts Institute of Technology, Cambridge, MA), Brett Stringer (QIMR Berghofer Medical Research Institute, Brisbane, Australia), Christopher Vakoc (Cold Spring Harbor Laboratory, Cold Spring Harbor, NY), Noboru Mizushima (The University of Tokyo, Tokyo, Japan), Article Title: Mouse genetics suggests cell-context dependency for Myc-regulated metabolic enzymes during tumorigenesis. Article Snippet: For retroviruses the following Article Title: Progerin reduces LAP2α-telomere association in Hutchinson-Gilford progeria Article Snippet: LAP2α was amplified from pTD15 (gift from Dr Roland Foisner, Vienna). cDNAs were cloned into retroviral vector pBABE-hygro (Addgene, Cambridge, MA) or doxycyclin-inducible lentiviral vector pTRIPZ (Open Biosystem, Singapore). Article Title: A Role for p53 in the Adaptation to Glutamine Starvation through the Expression of SLC1A3 Article Snippet: REAGENT or RESOURCE SOURCE IDENTIFIER Software and Algorithms GraphPad Prism 7 GraphPad software N/A FlowJo software v.10.3 FlowJo N/A CRISPR Design Tool Feng Zhang Lab (MIT) http://tools.genome-engineering.org CRISPOR Design Tool Tefor Infrastructure http://crispor.tefor.net/crispor.py IPA Qiagen https://www.qiagenbioinformatics.com/ products/ingenuity-pathway-analysis/ TopHat2 Kim et al., 2013 https://ccb.jhu.edu/software/tophat/ index.shtml HTSeq v.0.10.0 Simon Anders (EMBL Heidelberg) https://htseq.readthedocs.io/en/ release_0.10.0/ DESeq2 Love et al., 2014 https://bioconductor.org/packages/ release/bioc/html/DESeq2.html Cufflinks Trapnell et al., 2012 http://cole-trapnell-lab.github.io/ cufflinks/cuffdiff/ TraceFinder Version 4.1 Thermo Fisher Scientific OPTON-30626 Image Studio Lite Version 5.2.5 LI-COR https://www.licor.com/bio/products/ software/image_studio/ Article Title: CD44 correlates with longevity and enhances basal ATF6 activity and ER stress resistance. Article Snippet: REAGENT or RESOURCE SOURCE IDENTIFIER pBabe-hygro Morgenstern and Article Title: CUX1 Enhances Pancreatic Cancer Formation by Synergizing with KRAS and Inducing MEK/ERK-Dependent Proliferation Article Snippet: The oncogenic KrasG12D was cloned from the pBabe-puro vector, a kind gift from Channing Der (Addgene plasmid # 58902, Watertown, MA, USA), into the pBabe-hygro, a gift from Hartmut Land, Amplification:Article Title: Vimentin intermediate filaments and filamentous actin form unexpected interpenetrating networks that redefine the cell cortex Article Snippet: The PCR product is purified from an agarose gel and inserted into pBABE-hygro (pBABE-hygro is a gift from Hartmut Land and Jay P. Morgenstern, Imperial Cancer Research Fund, Lincoln's Inn Fields, London ( ) [ Article Title: Mouse Genetics Suggests Cell-Context Dependency for Myc-Regulated Metabolic Enzymes during Tumorigenesis Article Snippet: For retroviruses the following Article Title: VPS37A directs ESCRT recruitment for phagophore closure Article Snippet: The following plasmids were obtained from Hartmut Land (University of Rochester Medical Center, Rochester, NY), Jay Morgenstern (Imperial Cancer Research Fund, London, UK), Bob Weinberg (Whitehead Institute for Biomedical Research, Cambridge, MA), Feng Zhang (Massachusetts Institute of Technology, Cambridge, MA), Brett Stringer (QIMR Berghofer Medical Research Institute, Brisbane, Australia), Christopher Vakoc (Cold Spring Harbor Laboratory, Cold Spring Harbor, NY), Noboru Mizushima (The University of Tokyo, Tokyo, Japan), Article Title: Mouse genetics suggests cell-context dependency for Myc-regulated metabolic enzymes during tumorigenesis. Article Snippet: For retroviruses the following Article Title: Progerin reduces LAP2α-telomere association in Hutchinson-Gilford progeria Article Snippet: LAP2α was amplified from pTD15 (gift from Dr Roland Foisner, Vienna). cDNAs were cloned into retroviral vector pBABE-hygro (Addgene, Cambridge, MA) or doxycyclin-inducible lentiviral vector pTRIPZ (Open Biosystem, Singapore). Article Title: A Role for p53 in the Adaptation to Glutamine Starvation through the Expression of SLC1A3 Article Snippet: REAGENT or RESOURCE SOURCE IDENTIFIER Software and Algorithms GraphPad Prism 7 GraphPad software N/A FlowJo software v.10.3 FlowJo N/A CRISPR Design Tool Feng Zhang Lab (MIT) http://tools.genome-engineering.org CRISPOR Design Tool Tefor Infrastructure http://crispor.tefor.net/crispor.py IPA Qiagen https://www.qiagenbioinformatics.com/ products/ingenuity-pathway-analysis/ TopHat2 Kim et al., 2013 https://ccb.jhu.edu/software/tophat/ index.shtml HTSeq v.0.10.0 Simon Anders (EMBL Heidelberg) https://htseq.readthedocs.io/en/ release_0.10.0/ DESeq2 Love et al., 2014 https://bioconductor.org/packages/ release/bioc/html/DESeq2.html Cufflinks Trapnell et al., 2012 http://cole-trapnell-lab.github.io/ cufflinks/cuffdiff/ TraceFinder Version 4.1 Thermo Fisher Scientific OPTON-30626 Image Studio Lite Version 5.2.5 LI-COR https://www.licor.com/bio/products/ software/image_studio/ Article Title: CD44 correlates with longevity and enhances basal ATF6 activity and ER stress resistance. Article Snippet: REAGENT or RESOURCE SOURCE IDENTIFIER pBabe-hygro Morgenstern and Article Title: CUX1 Enhances Pancreatic Cancer Formation by Synergizing with KRAS and Inducing MEK/ERK-Dependent Proliferation Article Snippet: The oncogenic KrasG12D was cloned from the pBabe-puro vector, a kind gift from Channing Der (Addgene plasmid # 58902, Watertown, MA, USA), into the pBabe-hygro, a gift from Hartmut Land, |
